Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_116392755_116393074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116392755 - 116393074

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

TTCCCCCTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAG

U12 Branch Point Sequence:

TCCAGCCCATCT

Flanking Amino Acid:

QLVHPEESANVEAEDIKVCP

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.9

39.3

Major BPS

47.8

-0.1

1.6

64.2

Major PPT

72.1

0.5

0.9

65.4

36.1

Minor 5ss

28.3

-2.5

36.1

40.2

Minor BPS

37.1

-0.9

2.2

53.32

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022092

116390238 - 116395771

5534