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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116393226_116393796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116393226 - 116393796

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

TCTGTCCTCACA

Flanking Amino Acid:

LQEISDVHFLSPSGCTFWGK

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

78.6

0.64

0.8

72.3

32.5

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

-0.2

2.1

62.87

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022092

116390238 - 116395771

5534