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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116394498_116394675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116394498 - 116394675

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TAGGCAGTAGCT

Flanking Amino Acid:

VSPIITAVTVGIGVPLMLTY

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

81.5

32.7

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

72.4

0.5

0.9

65.8

Minor 5ss

35.8

-1.6

3.3

40.8

45.4

Minor BPS

41.9

-0.5

2.4

62.14

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022092

116390238 - 116395771

5534