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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116428532_116442202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116428532 - 116442202

Intron Length:

13671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CTTTCCATACAG

Flanking Amino Acid:

CGRWQKRREEVNQRNVPGID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

78.7

0.65

0.8

72.9

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

48.8

-0.2

2.1

61.5

45.9

Associated Gene:

Gene:

NRBP1

Ensembl Gene ID:

ENSAPLG00000005366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022039

116428373 - 116469555

41183

ENSAPLT00000005601

116428373 - 116468477

40105