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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116458506_116458778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116458506 - 116458778

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

AGACTGATAACA

Flanking Amino Acid:

NLHFFAPEYGEVANVTTAVD

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

62.7

0.32

1.2

39.8

Major PPT

81.6

0.71

0.9

75.5

38.4

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

43.3

-0.5

2.2

53.86

37.7

Associated Gene:

Gene:

NRBP1

Ensembl Gene ID:

ENSAPLG00000005366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022039

116428373 - 116469555

41183

ENSAPLT00000005601

116428373 - 116468477

40105