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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116458838_116459997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116458838 - 116459997

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TCTTGGTGAAGT

Flanking Amino Acid:

IYSFGMCALEMAVLEIQGNG

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

43.2

-0.4

2.6

68.08

48.5

Associated Gene:

Gene:

NRBP1

Ensembl Gene ID:

ENSAPLG00000005366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022039

116428373 - 116469555

41183

ENSAPLT00000005601

116428373 - 116468477

40105