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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116467286_116467399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116467286 - 116467399

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

AGAGCCATAACC

Flanking Amino Acid:

LELDKFLEDVRNGIYPLTAF

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

88.4

0.86

0.7

83.9

24.2

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

55.3

0.15

1.8

63.88

40.9

Associated Gene:

Gene:

NRBP1

Ensembl Gene ID:

ENSAPLG00000005366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022039

116428373 - 116469555

41183

ENSAPLT00000005601

116428373 - 116468477

40105