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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116468306_116468497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116468306 - 116468497

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

CCATGCTTCACT

Flanking Amino Acid:

ELVQLGFISEADQSRLTCLL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

83.9

0.76

0.8

37.2

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

49.6

0.05

2.2

68.01

48.6

Associated Gene:

Gene:

NRBP1

Ensembl Gene ID:

ENSAPLG00000005366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022039

116428373 - 116469555

41183