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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116469856_116469963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116469856 - 116469963

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGCG

5'SS Class:

major

3'SS Sequence:

TCTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

ACCTGCTGAATG

Flanking Amino Acid:

NVVSVVSGLLSITAGIVAIL

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

0.9

61.3

37.5

Major BPS

0.42

1.1

57.3

41.7

Major PPT

83.2

0.75

0.7

77.4

24.6

Minor 5ss

25.4

-2.8

3.1

27.6

37.3

Minor BPS

47.4

-0.3

1.9

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032684

116468498 - 116471636

3139

ENSAPLT00000022229

116468498 - 116471223

2726