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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116471271_116471564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116471271 - 116471564

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCCCC

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAC

U12 Branch Point Sequence:

CTTTTCTTATAG

Flanking Amino Acid:

PCGRTYGKDQLVKPGTLKEG

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

62.4

42.4

Major BPS

52.2

0.06

1.1

Major PPT

88.2

0.86

0.6

84.2

Minor 5ss

45.2

-0.5

2.7

60.3

44.3

Minor BPS

56.6

0.07

1.8

63.88

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032684

116468498 - 116471636

3139