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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116482242_116482757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116482242 - 116482757

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

TTTTGTTCCACA

Flanking Amino Acid:

QLVAMKKYSSAAELYLNLDL

Intron Amino Acid Position:

1657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.9

36.6

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

76.8

0.6

0.9

69.4

36.8

Minor 5ss

33.6

-1.9

3.5

49.7

46.1

Minor BPS

48.1

-0.1

2.3

71.01

41.7

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582