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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116486411_116487341_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116486411 - 116487341

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATAAAC

5'SS Class:

major

3'SS Sequence:

TTGCTTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTGCTTTTGATA

Flanking Amino Acid:

VNDMWEEAYRVAKAHGGTNS

Intron Amino Acid Position:

1383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

67.9

37.3

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

74.3

0.55

72.4

37.8

Minor 5ss

33.4

-1.9

2.9

35.8

40.8

Minor BPS

59.8

0.3

1.2

66.37

34.3

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582