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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116487459_116487537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116487459 - 116487537

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTCAATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTCCTCAATT

Flanking Amino Acid:

LSDTHLHLGKELEAEGRLQE

Intron Amino Acid Position:

1344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

76.2

0.59

0.9

35.6

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

0.96

1.4

32.2

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493