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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116494656_116496034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116494656 - 116496034

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

CCCATCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TTCTTCCCATCT

Flanking Amino Acid:

LEARQLHIAERCFAALGNMA

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

0.47

1.2

69.9

35.3

Major PPT

72.9

0.51

0.8

64.1

36.6

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

47.4

-0.1

2.1

72.42

44.5

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326