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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116496143_116496832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116496143 - 116496832

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTTCTGTTACT

Flanking Amino Acid:

GTAIDDGDYHRATAFLETLE

Intron Amino Acid Position:

916

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

70.8

0.47

68.3

37.8

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

54.3

0.22

2.3

80.6

41.3

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326