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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116497523_116499690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116497523 - 116499690

Intron Length:

2168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

TTTCTTCATGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTTCTTCATG

Flanking Amino Acid:

KLLFRDKKMRLQLYDVESST

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

81.4

0.71

0.8

78.3

29.4

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

60.1

0.17

1.8

66.07

42.7

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582