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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116499804_116500301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116499804 - 116500301

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAG

U12 Branch Point Sequence:

GCACCTTTAAGT

Flanking Amino Acid:

YLIDIKTIATVDLVGSYNAG

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

79.9

27.6

Major BPS

63.3

0.33

1.6

73.3

39.1

Major PPT

72.4

0.5

71.6

33.2

Minor 5ss

30.2

-2.3

3.3

39.9

46.1

Minor BPS

55.8

0.26

1.7

66.81

43.8

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582