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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116501845_116502970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116501845 - 116502970

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGAA

5'SS Class:

major

3'SS Sequence:

TATTGCATCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TCAACCTTGACT

Flanking Amino Acid:

GDISSNKLSEVAWQGSGGNE

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.2

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

70.2

0.45

0.9

67.3

38.7

Minor 5ss

28.6

-2.5

3.5

37.7

47.1

Minor BPS

73.1

0.81

1.3

80.96

40.7

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000040658

116472550 - 116512975

40426