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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116504137_116505397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116504137 - 116505397

Intron Length:

1261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TTTGTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

AATTCACTGACT

Flanking Amino Acid:

WKRDGSRICVGTLCGGVEQF

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.2

73.6

36.5

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

84.2

0.77

0.8

77.2

37.1

Minor 5ss

41.9

-0.9

2.5

49.3

41.1

Minor BPS

54.7

0.23

77.01

38.6

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493