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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116505522_116505608_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116505522 - 116505608

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTCATCT

Flanking Amino Acid:

GQAVVIGSYDRLRVLNWTPR

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

71.8

34.3

Major BPS

100

1.24

0.5

100

Major PPT

81.3

0.71

0.8

75.8

32.8

Minor 5ss

43.1

-0.8

3.1

57.8

47.2

Minor BPS

55.2

0.24

1.8

76.37

40.5

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040658

116472550 - 116512975

40426

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582