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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116505824_116506656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116505824 - 116506656

Intron Length:

833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCAAAG

5'SS Class:

major

3'SS Sequence:

ATGTCTAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTCAAGA

Flanking Amino Acid:

FDDEGSGESQGKLVTHPCPP

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.2

64.3

41.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

65.7

0.35

60.5

39.9

Minor 5ss

44.5

-0.6

2.7

57.1

47.2

Minor BPS

49.3

-0

1.8

60.95

39.7

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000025481

116472550 - 116512975

40426

ENSAPLT00000004476

116472650 - 116512975

40326

ENSAPLT00000047977

116471483 - 116512975

41493