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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116505824_116510822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116505824 - 116510822

Intron Length:

4999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTCAAGA

Flanking Amino Acid:

KVICNKFIQMGKLVTHPCPP

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

73.3

37.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

65.7

0.35

60.5

39.9

Minor 5ss

32.6

-2

3.3

45.3

43.7

Minor BPS

49.3

-0

1.8

60.95

39.7

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040658

116472550 - 116512975

40426