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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116508264_116508766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116508264 - 116508766

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGAAA

5'SS Class:

major

3'SS Sequence:

TTCTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CAATATTGATCA

Flanking Amino Acid:

IIVFGLAEGKVRLANTKNNK

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.2

38.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

88.2

0.86

0.6

87.7

22.4

Minor 5ss

29.5

-2.3

3.4

38.5

46.8

Minor BPS

44.3

-0.4

1.8

51.31

39.9

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000025481

116472550 - 116512975

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