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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116508833_116510822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116508833 - 116510822

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTCTTTTTAATT

Flanking Amino Acid:

KVICNKFIQMSAVTCLLWPA

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

73.3

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.1

0.66

0.9

76.5

Minor 5ss

32.6

-2

3.3

45.3

43.7

Minor BPS

0.74

1.2

78.3

39.3

Associated Gene:

Gene:

IFT172

Ensembl Gene ID:

ENSAPLG00000004257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047977

116471483 - 116512975

41493

ENSAPLT00000043038

116471394 - 116512975

41582

ENSAPLT00000025481

116472550 - 116512975

40426