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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116516999_116517418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116516999 - 116517418

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CAGGCACTAACT

Flanking Amino Acid:

ALDLWEAANAGSRQEQPLHL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

66.4

45.1

Major BPS

64.5

0.36

65.2

28.2

Major PPT

69.4

0.44

0.9

60.5

40.3

Minor 5ss

31.5

-2.1

3.1

39.9

45.7

Minor BPS

46.5

-0.1

62.99

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004273

116512239 - 116519488

7250