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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116518550_116519447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

116518550 - 116519447

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

TTCTCTTCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAT

U12 Branch Point Sequence:

TTCTCTTCCAAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

67.1

44.6

Major BPS

53.7

0.09

1.4

46.5

Major PPT

72.6

0.51

74.3

28.2

Minor 5ss

32.6

-2

3.5

40.1

Minor BPS

47.7

-0.1

2.1

64.41

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004273

116512239 - 116519488

7250