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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116577966_116578051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116577966 - 116578051

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

GGGGCCTGACGC

Flanking Amino Acid:

GGLREDHLCAATRGSLARPA

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

51.1

0.03

1.2

39.9

Major PPT

66.1

0.36

0.8

62.7

34.6

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

40.8

-0.7

44.37

43.4

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003637

116577053 - 116595515

18463