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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116577966_116579193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116577966 - 116579193

Intron Length:

1228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

ATTCCCACTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATATTAAAACT

Flanking Amino Acid:

GGLREDHLCADIRDTVKYKE

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

71.5

0.49

0.8

68.2

32.7

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

47.9

-0

1.9

70.25

40.7

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017968

116577053 - 116595561

18509