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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116581940_116582041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116581940 - 116582041

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

CACGTATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATTAAAT

Flanking Amino Acid:

ASGTIITEALASSFPSVVVY

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

31.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.9

0.49

61.6

43.3

Minor 5ss

38.1

-1.3

3.3

50.7

41.2

Minor BPS

58.6

0.35

1.9

79.82

41.4

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017968

116577053 - 116595561

18509

ENSAPLT00000003637

116577053 - 116595515

18463