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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116582137_116584541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116582137 - 116584541

Intron Length:

2405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

TFMSNMLYACSILYKTKLPF

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.6

0.73

0.7

74.8

35.5

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017968

116577053 - 116595561

18509

ENSAPLT00000003637

116577053 - 116595515

18463