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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116590019_116592001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116590019 - 116592001

Intron Length:

1983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTGTATTTATCT

Flanking Amino Acid:

QLSKAVDEYEREYRPEYERL

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

89.8

0.89

0.7

84.9

29.8

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

55.8

0.26

1.8

73.5

43.3

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017968

116577053 - 116595561

18509

ENSAPLT00000003637

116577053 - 116595515

18463