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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116594147_116594638_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116594147 - 116594638

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

TGTTCCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTGTGTATAGCC

Flanking Amino Acid:

TVCMQGNTLAGSDDASAMGP

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.8

30.7

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

69.6

0.44

67.8

Minor 5ss

45.7

-0.5

2.5

58.1

46.4

Minor BPS

45.9

-0.3

2.2

62.81

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017968

116577053 - 116595561

18509

ENSAPLT00000003637

116577053 - 116595515

18463