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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116594750_116595423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116594750 - 116595423

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

TTTGTTTTCTCT

Flanking Amino Acid:

ESDTDDIDHEVTEESHEEPA

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

64.3

0.35

1.2

55.4

Major PPT

86.3

0.82

0.7

84.9

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

41.2

-0.5

3.6

74.38

43.4

Associated Gene:

Gene:

GPN1

Ensembl Gene ID:

ENSAPLG00000003530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017968

116577053 - 116595561

18509

ENSAPLT00000003637

116577053 - 116595515

18463