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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11696509_11704623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11696509 - 11704623

Intron Length:

8115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGAG

5'SS Class:

major

3'SS Sequence:

CTGTTCCGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TGTTCCGTACAG

Flanking Amino Acid:

RGLLVPALKKVQVQVHPKLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

64.4

41.8

Major BPS

0.1

59.7

32.6

Major PPT

74.6

0.55

68.7

37.3

Minor 5ss

-2.6

3.1

31.3

Minor BPS

47.2

-0.3

2.4

61.3

46.1

Associated Gene:

Gene:

SOS1

Ensembl Gene ID:

ENSAPLG00000010443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010932

11696422 - 11743016

46595