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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11707992_11711563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11707992 - 11711563

Intron Length:

3572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCTTTGCTACCT

Flanking Amino Acid:

DIKVAMCADKVLMDMFHQDV

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

69.5

0.44

0.9

62.4

38.9

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

45.2

-0.2

2.5

71.51

45.7

Associated Gene:

Gene:

SOS1

Ensembl Gene ID:

ENSAPLG00000010443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010932

11696422 - 11743016

46595