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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11715023_11726621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11715023 - 11726621

Intron Length:

11599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCAATGTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TAGTACTTACTG

Flanking Amino Acid:

HCLHYFELLKQLEEKSEDQE

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.2

Major BPS

76.9

0.67

1.2

31.9

Major PPT

70.9

0.47

64.1

41.3

Minor 5ss

35.5

-1.6

2.9

42.3

38.1

Minor BPS

50.5

-0.1

1.9

57.32

44.4

Associated Gene:

Gene:

SOS1

Ensembl Gene ID:

ENSAPLG00000010443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010932

11696422 - 11743016

46595