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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11728404_11732947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11728404 - 11732947

Intron Length:

4544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

ACAAGCATAATT

Flanking Amino Acid:

IERLTYHMYADPNFVRTFLT

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

80.4

0.68

0.8

80.4

31.6

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

45.9

-0.2

60.92

42.8

Associated Gene:

Gene:

SOS1

Ensembl Gene ID:

ENSAPLG00000010443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010932

11696422 - 11743016

46595