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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11738487_11739465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11738487 - 11739465

Intron Length:

979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACCT

Flanking Amino Acid:

YCLRVEFDIRRFFENLNPMG

Intron Amino Acid Position:

993

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.1

0.77

0.8

81.4

34.9

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

74.2

0.84

1.5

90.89

33.1

Associated Gene:

Gene:

SOS1

Ensembl Gene ID:

ENSAPLG00000010443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010932

11696422 - 11743016

46595