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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11754263_11755122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11754263 - 11755122

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGCCTA

5'SS Class:

major

3'SS Sequence:

TCTTATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTTCTTATTT

Flanking Amino Acid:

PPAPSSGTPTPHLMPQMKKP

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

60.2

46.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.5

0.64

82.8

32.2

Minor 5ss

43.3

-0.7

3.1

61.1

43.5

Minor BPS

69.9

0.7

1.5

84.13

Associated Gene:

Gene:

ARHGEF33

Ensembl Gene ID:

ENSAPLG00000011311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011768

11751621 - 11765460

13840

ENSAPLT00000011765

11748953 - 11765460

16508