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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11758007_11758503_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11758007 - 11758503

Intron Length:
497

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGTTAC

5'SS Class:
strong_major

3'SS Sequence:
CCTCATTTATAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTCAT

U12 Branch Point Sequence:
CTTTCCTCATTT

Flanking Amino Acid:
DIFLKLTNDENNFLDYYVAY

Intron Amino Acid Position:
336

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.8
80.1
28.4

Major BPS
82.3
0.8
0.9
81.8
30.8

Major PPT
63.1
0.29
1.1
67.9
36.3

Minor 5ss
46.6
-0.3
2.5
60.6
44.5

Minor BPS
61.1
0.43
1.8
79.99
42.5

Associated Gene:

Gene:
ARHGEF33

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11748953 - 11765460
16508

11751621 - 11765460
13840