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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11760078_11761296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11760078 - 11761296

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATGTCATGACCC

Flanking Amino Acid:

YGSVKVVAGPGPTLETDDSL

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

83.8

0.76

0.8

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

48.2

-0.1

63.05

Associated Gene:

Gene:

ARHGEF33

Ensembl Gene ID:

ENSAPLG00000011311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011768

11751621 - 11765460

13840

ENSAPLT00000011765

11748953 - 11765460

16508