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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11763283_11764683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11763283 - 11764683

Intron Length:

1401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGAAT

U12 Branch Point Sequence:

TTTTGCTTGTTC

Flanking Amino Acid:

EMKNSLNTFKEELSDAKSMI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

47.7

-0.1

1.6

55.4

48.1

Major PPT

75.9

0.58

0.9

72.9

37.4

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

43.9

-0.5

3.6

73.12

38.9

Associated Gene:

Gene:

ARHGEF33

Ensembl Gene ID:

ENSAPLG00000011311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011768

11751621 - 11765460

13840

ENSAPLT00000011765

11748953 - 11765460

16508