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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11783174_11784234_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11783174 - 11784234

Intron Length:
1061

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATTTTA

5'SS Class:
strong_major

3'SS Sequence:
TCATTAAACACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTTAT

U12 Branch Point Sequence:
TTTTCTTTATCC

Flanking Amino Acid:
IYIGTWKNDKMNGTGRLEHP

Intron Amino Acid Position:
112

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
86
25

Major BPS
83.9
0.84
1
73.9
41.3

Major PPT
65.2
0.34
1
59.1
39.8

Minor 5ss
43.8
-0.7
2.8
58.6
45.8

Minor BPS
77.1
0.83
1.5
86.09
32

Associated Gene:

Gene:
MORN2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11780736 - 11784567
3832