Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_11785941_11786624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11785941 - 11786624

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTTTCAT

5'SS Class:

major

3'SS Sequence:

TTTTAATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATTTTAATT

Flanking Amino Acid:

CLFEEPRLENRSSASARRGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.3

63.4

42.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.2

0.86

0.8

85.7

33.4

Minor 5ss

37.5

-1.4

2.8

50.6

45.7

Minor BPS

70.3

0.72

1.2

80.87

34.9

Associated Gene:

Gene:

DHX57

Ensembl Gene ID:

ENSAPLG00000011333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011838

11785705 - 11803976

18272