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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11790856_11791128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11790856 - 11791128

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTTTAATT

Flanking Amino Acid:

HQVLVVSGMTGCGKTTQIPQ

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.8

43.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.65

0.9

73.7

35.9

Minor 5ss

32.4

-2

3.6

38.1

46.8

Minor BPS

70.5

0.72

1.2

80.41

Associated Gene:

Gene:

DHX57

Ensembl Gene ID:

ENSAPLG00000011333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011838

11785705 - 11803976

18272