Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_11815483_11815804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11815483 - 11815804

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

CCCTGCCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTTAC

U12 Branch Point Sequence:

CGGCGCTTACCC

Flanking Amino Acid:

MSRYGRYGGETKVYVGNLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

57.9

41.8

Major BPS

0.1

1.2

46.7

38.6

Major PPT

73.6

0.53

0.8

69.1

31.5

Minor 5ss

31.7

-2.1

3.3

41.6

45.3

Minor BPS

45.5

-0.3

52.04

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013031

11814504 - 11821444

6941