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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11817970_11820138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11817970 - 11820138

Intron Length:

2169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TCTTGCTGAGCT

Flanking Amino Acid:

RSRSVTWPRSRSRSHGRSKS

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

52.1

0.14

2.1

76.75

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013031

11814504 - 11821444

6941