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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11850444_11855175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11850444 - 11855175

Intron Length:

4732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTTGT

5'SS Class:

major

3'SS Sequence:

TCTTCTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TTAGCTCTAACT

Flanking Amino Acid:

IQNPLYPITVDVLYTVCNPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.6

40.8

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

81.3

0.71

0.7

81.1

24.1

Minor 5ss

-1

3.1

55.6

43.9

Minor BPS

62.6

0.48

1.8

81.43

40.1

Associated Gene:

Gene:

HNRNPLL

Ensembl Gene ID:

ENSAPLG00000013082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013650

11850206 - 11867161

16956

ENSAPLT00000018730

11850206 - 11865581

15376