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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11857719_11861678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11857719 - 11861678

Intron Length:

3960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCCGTATGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

CCATAGTAAACT

Flanking Amino Acid:

DYTKPYLGRRDRGKGRQRQA

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

82.3

32.2

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

62.5

0.28

61.9

38.7

Minor 5ss

43.4

-0.7

3.1

60.6

44.5

Minor BPS

43.6

-0.4

2.4

61.1

48.2

Associated Gene:

Gene:

HNRNPLL

Ensembl Gene ID:

ENSAPLG00000013082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018730

11850206 - 11865581

15376

ENSAPLT00000013650

11850206 - 11867161

16956