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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11861751_11863146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11861751 - 11863146

Intron Length:

1396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGATGTTTCATC

Flanking Amino Acid:

HPSSFRHDGYGSHGPLLPLP

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.56

0.8

73.7

31.2

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

46.9

-0.2

2.1

59.25

40.5

Associated Gene:

Gene:

HNRNPLL

Ensembl Gene ID:

ENSAPLG00000013082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018730

11850206 - 11865581

15376

ENSAPLT00000013650

11850206 - 11867161

16956